SE2020925

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6127
  • Medicago truncatula
  • SE2020925
  • Mutator
  • M159
  • MtChr5:14904795-14904997
  • TATCCCTTA
  • TAGGAAAATACTTAATTGGGCACAAGGGTTTGAGCACTTGGTTTGAGCACACATACATAATTGAAAAATTGTAGAGAGAGAAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATCCCT   -    AT    AA           GG         T G     A    A         TT ---------AAA      -A            AATT
       TAG GAAA  ACTT  TTGGGCACAAG  TTTGAGCAC T GTTTG GCAC CATACATAA  G            AATTGT  GAGAGAGAAAAT    
       ||| ||||  ||||  |||||||||||  ||||||||| | ||||| |||| |||||||||  |            ||||||  ||||||||||||    A
       ATC CTTT  TGAA  AACCTGTGTTC  AAATTTGTG A TAAAT CGTG GTGTGTGTT  C            TTAATA  TTTTTTCTTTTA    
ATTCCCT   T    -C    CG           GA         T G     C    A         TT ATATAAAGTAAA      AA            ATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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