SE2020928

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6130
  • Medicago truncatula
  • SE2020928
  • Mutator
  • M76
  • MtChr1:10903489-10903691
  • TTAAAAAAA
  • AAGGGTCCTGCTAACCGGTGCCCCGGGGCACTGGTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAAA     TCC                -               CATACCATT           ----TA  ATAAAAGGAAATTGTTTTTGACATTATTA
       AAGGG   TGCTAACCGGTGCCCC GGGGCACTGGTTAAG         AAGGGAATTAT      CC                             
       |||||   |||||||||||||||| |||||||||||||||         |||||||||||      ||                              
       TTCCC   ACGATTGGCCACGGGG CCTCGTGGCCAATTC         TTCCTTTAATA      CA                             
AAAAAAA     TTT                G               CCATACTTT           TAACAT  ATTACGTAATTTTAACACATTAATTAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3