SE2020937

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6139
  • Medicago truncatula
  • SE2020937
  • Mutator
  • M161
  • MtChr5:1847537-1847739
  • TTCAAACAC
  • GAATAATTCTTGAGTGGACACAAAGATTTGGACCCTCTATTTGGTCACACACACAAAAATATGGACATGATA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCAAACAC  AT        A     C    A                       C     --C     TAT   -CAT    TAATCATT   A      TGA
         GA  AATTCTTG GTGGA ACAA GATTTGGACCCTCTATTTGGTCA ACACA   AAAAA   GGA    GATA        TAA AATTAA   
         ||  |||||||| ||||| |||| ||||||||||||||||||||||| |||||   |||||   |||    ||||        ||| ||||||    
         CT  TTGAGAAC CACCT TGTT TTAAACCTGGGAGATAAACCAGT TGTGT   TTTTT   CCT    CTAT        ATT TTAATT   
CACAAACTT  CT        C     A    C                       C     ATA     ---   TTTT    -CTTCTTT   A      TAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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