SE2020945

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6147
  • Medicago truncatula
  • SE2020945
  • Mutator
  • M162
  • MtChr8:2324298-2324492
  • CCTACTAAG
  • GGAG

Secondary structure and sequence

TSD    TIR
5'



3' 
CCTACTAA    AAAG   A  A   T       A  A      TTGACTTA  CG     C       TTTAA      --   TA        TGTGA
        GGAG    TCT AT TAG CACAAAC CA ATAAAA        GG  GCACA ACATAAA     AGATAA  AAA  AAAAATAA     
        ||||    ||| || ||| ||||||| || ||||||        ||  ||||| |||||||     ||||||  |||  ||||||||      
        CCTC    AGA TG ATC GTGTTTG GT TATTTT        CC  TGTGT TGTATTT     TCTATT  TTT  TTTTTATT     
GAACTATC    GTTA   A  G   T       G  C      -TTATAAA  TG     A       --TAC      AA   TC        TAATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3