SE2020949

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6151
  • Medicago truncatula
  • SE2020949
  • Mutator
  • M86
  • MtChr8:4213198-4213391
  • TTTATTTAA
  • TTATTTAAGGGTCATGTTAACTTGTGTCCTAAGGACACATGTTAAGCAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
T   TT       -C                 -    A           C   -CCAA        ACTTTGCATTGGAAAACATAATATATTGACTTT
 TTA  TAAGGGT  ATGTTAACTTGTGTCCT AAGG CACATGTTAAG AAC     AAAGAGCA                                 
 |||  |||||||  ||||||||||||||||| |||| ||||||||||| |||     ||||||||                                  
 AAT  ATTTCCG  TACGATTGAACACGGGA TTCC GTGTACAATTC TTG     TTTCTTTA                                 
    TT       TT                 G    C           C   AATAA        TATTCGTATTTTTCAGCACGTAAGTTGAAGAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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