SE2050956

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6158
  • Medicago truncatula
  • SE2050956
  • PIF/harbinger
  • To34
  • MtChr8:19291936-19292220
  • TAT
  • GGTCCTATTTGGATAAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
 TAT    C     G   AA  AACTCAAT   GCACTTATAGCATAAGCGCTTATCATACAAGTGCATATGTATAAGTTATTTCTATAACAAAATATAAAATCAAATTGAATTGTTTTCATATAAGCTATAAATTGTTTTCAT
    GGTC TATTT GAT  AC        TAA                                                                                                               
    |||| ||||| |||  ||        |||                                                                                                                
    CCAG ATAAA CTA  TG        TCG                                                                                                               
GATC    -     A   AC  -ATTAAAC   AATAGCCGACCATATTCGTGAATACTCTATCCAACTCTATAGAATAGCTTTGTTGAATATTGTACTAGTATTGACAAAAGTCGAATAAATAATTTGAGAGGTACTATCGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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