SE2020969

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6171
  • Medicago truncatula
  • SE2020969
  • Mutator
  • M163
  • MtChr3:27327538-27327756
  • TAAAAGTTG
  • TTGGGGATGGGTTTGTCTGCTGTAGAAAAAGCACGCTGTTTCACGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAG      -A        TC                             C     CAATCTCAGCCACACATTTGCAATCAGACGGTTCAGCTTAACGCAGTTACAA
      TTGGGG  TGGGTTTG  TGCTGTAGAAAAAGCACGCTGTTTCACGT GTAAA                                                    
      ||||||  ||||||||  ||||||||||||||||||||||||||||| |||||                                                     
      AATCCC  ACCTAAAC  ACGACATCTTTTTCGTGCGACAAAGTGCG ATATT                                                    
GTTGAA      AA        -C                             -     GCTTAATCCTGGCAGTATAACATTACACACCAACTCTACCAAATGTCACTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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