SE2020970

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6172
  • Medicago truncatula
  • SE2020970
  • Mutator
  • M18
  • MtChr8:1054828-1055034
  • TAATTAGAA
  • AGAGGAATGCTAGCAATACTCACTTTTTAACACTCTCTCTAGCACTCACTCTTCTGTTGGATGAAATCAATGTATGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTAGA    GA       C     T A     T     T        C          C      ATG      A   AT   CAAC       ---TG  GG
        AGAG  ATGCTAG AATAC C CTTTT AACAC CTCTCTAG ACTCACTCTT TGTTGG   AAATCA TGT  GTC    CACTTTG     TG  
        ||||  ||||||| ||||| | ||||| ||||| |||||||| |||||||||| ||||||   |||||| |||  |||    |||||||     ||   
        TCTC  TACGATC TTGTG G GAAAA TTGTG GAGAGATT TGAGTGAGAA ATAACC   TTTAGT ACA  TAG    GTGAAAC     AC  
AAGATTAA    AT       A     T A     C     T        A          A      AAA      A   CC   --AT       TTTTA  TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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