SE2020973

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6175
  • Medicago truncatula
  • SE2020973
  • Mutator
  • M158
  • MtChr3:23286507-23286703
  • GACAAAATA
  • GAG

Secondary structure and sequence

TSD    TIR
5'



3' 
GACAAAATA   AAATT  A  T   T                -    T TA       --   ---     A         ATA     TAAT   ATG  GT
         GAG     CT AC TGG CACAAACACAAATAAA AAGG T  GGCACAC  ACA   ATGGA AAAAATAAA   GAAAA    GAT   AG  
         |||     || || ||| |||||||||||||||| |||| |  |||||||  |||   ||||| |||||||||   |||||    |||   ||   
         CTC     GA TG GCT GTGTTTGTGTTTATTT TTCC A  CCGTGTG  TGT   TACTT TTTTTATTT   CTTTT    CTA   TC  
ATAAAACAG   GTTCT  A  T   C                A    C TC       AG   ATT     C         --C     ---T   AAA  AG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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