SE2020980

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6182
  • Medicago truncatula
  • SE2020980
  • Mutator
  • M11
  • MtChr2:7247321-7247515
  • TAACTACTT
  • TACTTGAGTCTTGTTAATGAGTGTCTCTGGACACTCTTTAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
   TAAC   TT   TCT              T    -       T     -------A    AAAAAAAGAAACTATCTTATAAAAAAAAAAGTCAAATATTT
       TAC  GAG   TGTTAATGAGTGTC CTGG ACACTCT TAAGG        TTCT                                         
       |||  |||   |||||||||||||| |||| ||||||| |||||        ||||                                         T
       ATG  CTT   ACAATTGCTCACAG GGCC TGTGAGA ATTCT        ACTA                                         
TTCATCA   -T   --T              C    C       T     GAAAATTT    TTGAAAAATACTTTTATATACATTAGTTACGTAACCTTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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