SE2020982

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6184
  • Medicago truncatula
  • SE2020982
  • Mutator
  • M147
  • MtChr4:18077749-18077941
  • ATAAAAGTC
  • GAAGAATGTTCTTCACACTTCAATCAATTCTAGGAAACACTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAAAAGTC     A    C  C   C     T  ATT      AAC     TAATTTATCAACATAACAT   CGGTAGTTAACTGCCGATGGATTTTAACT
         GAAGA TGTT TT ACA TTCAA CA   CTAGGA   ACTAG                   CAT                             
         ||||| |||| || ||| ||||| ||   ||||||   |||||                   |||                             G
         CTTTT ACAA AA TGT AAGTT GT   GATTTT   TGGTC                   CTG                             
CTTAAAATA     A    C  A   T     T  CCC      GTA     --------------TTTTT   CATTTACAGGTAGCGGTCAATTGACGGCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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