SE2020998

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6200
  • Medicago truncatula
  • SE2020998
  • Mutator
  • M162
  • MtChr4:4838983-4839187
  • CTCAATTCA
  • GAGCAATTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCAATTCAC   C  T   TACCTA       T C     C    A           A        A    A       A     -    -     T   CAC
          GAG AA TCT      GTCACAA C CAAAT AAAA TATTTGGGCAT CATACATA ATAG GAGAATT AAAGA AAAA TAAAT AGT   
          ||| || |||      ||||||| | ||||| |||| ||||||||||| |||||||| |||| ||||||| ||||| |||| ||||| |||    
          CTC TT AGA      CAGTGTT G GTTTA TTTT GTAAATCTGTG GTGTGTAT TATT TTTTTAA TTTCT TTTT ATTTA TTA   
CACTTAACTC   T  C   TTCAAC       T T     T    A           C        C    C       A     A    C     -   CTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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