SE2021003

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_6205
  • Medicago truncatula
  • SE2021003
  • Mutator
  • M81
  • MtChr8:23400979-23401196
  • ATATAAATT
  • GAGCAATGTTATATCTCTAGAAAAATAACATTAAGAATTCTTCAAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 ATATAAATT   C        A              A           C       ATAAAGAG     AATCACAAT     A TTGCCACAATTCAAGGAGGTGTGGCTGAAAA
          GAG AATGTTAT TCTCTAGAAAAATA CATTAAGAATT TTCAAGA        CAGCC         GCACT C                               
          ||| |||||||| |||||||||||||| ||||||||||| |||||||        |||||         ||||| |                               A
          CTT TTACGATA AGAGATCTTTTTAT GTAGTTCTTAA AAGTTCT        TTTCG         TGTTT A                               
TTAAATATAC   -        A              C           A       -------G     -------AC     - AAATTAATGTATAAATAAACAAGTGAAGGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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