SE3320019

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7484
  • citrus sinensis
  • SE3320019
  • Mutator
  • M5
  • chr3:3134853-3135011
  • ATCAAAGTG
  • GTGGGGGGAACCTTAGGTGCAACTGTGGCACCGTGCCACAGTTGTATCTAACCGTTGGATGTCAGTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
 ATCAAA     --   AAC  TA                                   A           CAG    CCCC
       GTGGG  GGG   CT  GGTGCAACTGTGGCACCGTGCCACAGTTGTATCTA CCGTTGGATGT   TGGA    
       |||||  |||   ||  ||||||||||||||||||||||||||||||||||| |||||||||||   ||||    A
       TACCT  TCC   GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGAT GGCAACCTACG   ACCT    
GTGAAAC     AG   ---  TG                                   C           TTA    AACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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