SE3320024

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7489
  • citrus sinensis
  • SE3320024
  • Mutator
  • M7
  • chr9:5846390-5846528
  • TCTAACGTA
  • ACGTAGGCTCTGGCTAAGTTACGTTAAACGTAACTTACGCCAGACACAGCAACAGTGTACAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TCTA    ---   CT                                  A            -  ACA  AGT
    ACGT   AGG  CTGGCTAAGTTACGTTAAACGTAACTTACGCCAG CACAGCAACAGT GT   GT   
    ||||   |||  |||||||||||||||||||||||||||||||||| |||||||||||| ||   ||    
    TGCA   TCC  GGCCGATTCAATGCAATTTGCATTGAATGCGGTC GTGTCGTTGTCA CG   CA   
   A    ATC   TC                                  C            A  --C  GGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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