SE3320042

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7507
  • citrus sinensis
  • SE3320042
  • Mutator
  • M21
  • chr7:28809249-28809407
  • CAAAAAACA
  • GGGCAAAACTATGTTGCAACAGTGGTATGGTACCACAGTTGCAACCGGCTATTGGATCTATAGTTGTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
CAAAAAACA   CAA                      G       A     AAC              ATA    -   AC
         GGG   AACTATGTTGCAACAGTGGTAT GTACCAC GTTGC   CGGCTATTGGATCT   GTTG TAT  
         |||   |||||||||||||||||||||| ||||||| |||||   ||||||||||||||   |||| |||   
         CCC   TTGATACAACGTTGTCACCATG CATGGTG CAACG   GTCGGTAATCTAGA   CGAT ATG  
ACAAAAAAC   AGG                      A       A     AAA              --A    T   TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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