SE3320043

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7508
  • citrus sinensis
  • SE3320043
  • Mutator
  • M5
  • chr2:13305957-13306115
  • CGTTTATTA
  • GGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
CGTTTATTAG    --AACA                                                  TAG  AACCCC
          GGGA      TGTGGTGCAACTGTGGTACCGTGTCACAGTTGCATCCAGCCGTTGGATGC   TG      
          ||||      ||||||||||||||||||||||||||||||||||||||||||||||||||   ||      A
          CCCT      ATACCACGTTGACACCATGGCACGGTGTCAACGTAGGTCGGCGACCTACG   AC      
  ATTATTTG    AGTCCG                                                  TGA  CTAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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