SE3320050

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7515
  • citrus sinensis
  • SE3320050
  • Mutator
  • M26
  • chr4:11635574-11635771
  • CTAAAATGG
  • TGGGAGAAATTCTAAAATACCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTAAAA           C        C  ---------AG      --  CAACCAATTGATGCATGAATGACATGTGTAATTAAATTTAATACAATCACCACT
      TGGGAGAAATT TAAAATAC TC           ATGTAT  TA                                                      
      ||||||||||| |||||||| ||           ||||||  ||                                                      T
      ATCCTCTTTAA ATTTTATG AG           CAGTGG  AT                                                      
GGTAAA           A        T  ACTCCATGGTA      GT  GTTGTTCATTACTACTGTACTGTACACACATAAATAAAATTTAGTGATAGTAGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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