SE3320054

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7519
  • citrus sinensis
  • SE3320054
  • Mutator
  • M23
  • chr2:16486423-16486581
  • ATGTTTGCA
  • TGTTTGCAGGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
A   TT   -   - AAAC       AC  C                     A     A         CTAGCCCA     GTCA
 TGT  GCA GGG C    CTATGGT  CA AGTTGTATGGTACCACAGCTG ATCCA CCATTGAAT        CAGTT    
 |||  ||| ||| |    |||||||  || ||||||||||||||||||||| ||||| |||||||||        |||||     
 ACG  TGT CCC G    GATACCA  GT TCAACATACCATGGTGTCGAC TAGGT GGTAACTTA        GTCAA    
    TT   A   A -GTC       CA  A                     C     C         -------A     AACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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