SE3320056

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7521
  • citrus sinensis
  • SE3320056
  • Mutator
  • M27
  • chr4:18405340-18405505
  • ACAAAACTG
  • TGGGGTCCGGCTATGTTGCAACTGTAGTACCGTGCCACAGTTGCAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
 ACAAAAC    G CC                                       CAGC                  -GAGG  TG
        TGGG T  GGCTATGTTGCAACTGTAGTACCGTGCCACAGTTGCAAC    CATTGGATCCACTTGGAT     GT  
        |||| |  |||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||     ||   
        ACCT A  CCGATACAACGTTGACATCATGGCACGGTGTTAACGTTG    GTAATCTAGGTGAACCTA     CA  
GTCAAAAC    G -A                                       ---A                  GGTGA  AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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