SE3320066

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7531
  • citrus sinensis
  • SE3320066
  • Mutator
  • M4
  • chr6:1626648-1626788
  • ATTATTTAA
  • TTATTTAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
A   TT   -  CAAA              C           C         TC     C    T  A   G
 TTA  TAA GG    CACTACCTTACAAT AATGTATGGTA ATCCCTCAC  ATGAA AGTG AT AGT 
 |||  ||| ||    |||||||||||||| ||||||||||| |||||||||  ||||| |||| || ||| G
 AAT  ATT CC    GTGATGGAATGTTA TTATATACCAT TAGGGAGTG  TACTT TCAC TA TCA 
    TT   A  TAGG              A           A         --     A    T  C   G
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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