SE3320067

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7532
  • citrus sinensis
  • SE3320067
  • Mutator
  • M29
  • chr2:15041750-15041895
  • TTATAACAT
  • TTATAACATGGGAGCCTTTAAGTTACAATAATTGTACCATACATCTCTCATGTGAACCACACAAAATTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
         CAT  G  CCT                   C                            A    AGG
   TTATAA   GG AG   TTAAGTTACAATAATTGTA CATACATCTCTCATGTGAACCACACAAA TTGT   
   ||||||   || ||   ||||||||||||||||||| |||||||||||||||||||||||||||| ||||   A
   AATATT   CC TT   GATTCAATGTTATTAACAT GTATGTAGAGAGTACACTTGGTGTGTTT AACA   
TAC      ---  G  TAC                   T                            -    CCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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