SE3320076

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7541
  • citrus sinensis
  • SE3320076
  • Mutator
  • M6
  • chr3:23901612-23901781
  • CTTTTCTAC
  • GGAC

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTTTCTAC    CTGT            T       CAAAC   CC   TCATCCCACCATCCGATTTTCTTTTGTTTAGTTTCTCA
         GGAC    CTATGTTACAGA TCTGTAA     ATC  CCG                                      
         ||||    |||||||||||| |||||||     |||  |||                                      C
         CCTG    GATGCAATGTCT AGACATT     CGA  TGT                                      
CATCTTTTC    TTTT            T       -----   --   CTGACGTCGTAGTCGGCAACCTACACCAACCTACACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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