SE3320084

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7549
  • citrus sinensis
  • SE3320084
  • Mutator
  • M35
  • chr2:2469775-2469928
  • CTATTTATA
  • TATTTATAGGGTCCAGCTATGGTATCACAGTGGTACCATGCCATAG

Secondary structure and sequence

TSD    TIR
5'



3' 
C   TT      -TCC                     C          GC   TAGCTGAATCCAGCCATTAGATCTAA
 TAT  ATAGGG    AGCTATGGTATCACAGTGGTA CATGCCATAG  CCA                          
 |||  ||||||    ||||||||||||||||||||| ||||||||||  |||                           
 ATA  TATCCC    TTGATACCATGGTGTTATCAT GTATGGTGTC  GAC                          
    TT      CGTT                     A          --   CTAAGTCAGGTGTCACCAGAGGTATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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