SE3320093

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7558
  • citrus sinensis
  • SE3320093
  • Mutator
  • M5
  • chr8:1084032-1084190
  • AAAGATTAA
  • GGATCAGGCTACGGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGCCGTTGGATGCAGTTAGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
  AAAGATTAA   TC  G  AC    C        C      C                          -   TA    AG
           GGA  AG CT  GGTG AACTGTGG ACCGTG CACAGTTGCATCTAGCCGTTGGATGC AGT  GATT  
           |||  || ||  |||| |||||||| |||||| |||||||||||||||||||||||||| |||  ||||  T
           CCT  TT GA  CCAC TTGACACC TGGCAC GTGTCAACGTAGATTGGCAACCTACG TCA  CTGG  
AATTAGAAACC   --  G  AT    A        A      A                          G   -C    AG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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