SE3320121

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7586
  • citrus sinensis
  • SE3320121
  • Mutator
  • M5
  • chr1:8865895-8866053
  • CAATTAATA
  • ATTAATAGGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
CA      A    -AAAC  TA                                               T   -   CTCC
  ATTAAT GGGG     CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGCCGTTGGATGC AGT GGA    
  |||||| ||||     ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||    A
  TAATTA CCCT     GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGATCGGCAACCTACG TCA TCT    
 A      A    AGTCC  TG                                               -   A   AACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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