SE3320135

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7600
  • citrus sinensis
  • SE3320135
  • Mutator
  • M35
  • chr2:2469775-2469928
  • TATAAATAG
  • ATAGGGGCAAAACTATGGTACCACAATAGTATCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TATAA      -G  AAA        C    ATA       A   CAGCTGGATTCAGTCCACAGTGGTCTCCATAGT
      ATAGGG  CA   CTATGGTA CACA   GTATCAT CCA                                 
      ||||||  ||   |||||||| ||||   ||||||| |||                                 T
      TATCCC  GT   GATACCAT GTGT   CATGGTA CGG                                 
GATAAA      AG  --C        A    CAC       -   TATCCGGGTATCGACTTAGGTCGGTAATCTAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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