SE3320136

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7601
  • citrus sinensis
  • SE3320136
  • Mutator
  • M40
  • chr1:3096627-3096797
  • TGGCTTTTA
  • GGCTTTTAGGAGAAGTCTATGTTACAGATTCTGTAACATACATCC

Secondary structure and sequence

TSD    TIR
5'



3' 
   T    TTT     AA T     T                    -T  CCCCACT   T  A     --C     -CC   A   GGAA
    GGCT   AGGAG  G CTATG TACAGATTCTGTAACATACA  CC       CCA GC CTCCA   GTGTC   TGC TGT    
    ||||   |||||  | ||||| ||||||||||||||||||||  ||       ||| || |||||   |||||   ||| |||    A
    TCGG   TCCTC  C GATGC ATGTCTAAGACATTGTATGT  GG       GGT CG GGGGT   CACGG   ACG ACG    
ATTT    ---     GA C     C                    CT  TCCAATC   -  -     TCC     TAA   A   AAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3