SE3320137

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7602
  • citrus sinensis
  • SE3320137
  • Mutator
  • M6
  • chr9:11022049-11022218
  • GTTAATTTA
  • GTTAATTTAGGACCTGTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
         TTA    C  T   -T      GATTCTGTAACAAACATCTCCCGTCATCCCACCATCCGATTTTCTATTGTTCAGTTT
   GTTAAT   GGAC TG CTA  GGTACA                                                         
   ||||||   |||| || |||  ||||||                                                         C
   TAATTG   CCTG GC GAT  AATGTC                                                         
ATT      ---    A  T   CG      TTAGACATTCCATGTCTGACGTCGTAGTCGGCAACCTACACCAACCTACACCTCACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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