SE3320162

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7627
  • citrus sinensis
  • SE3320162
  • Mutator
  • M11
  • chr5:4953166-4953306
  • ATGAATTAA
  • TGAATTAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
A   A   A  CCAGTG            C                       A     AT C      TGG
 TGA TTA GG      CTATGTTACGTT AACGTAACATACACACACTCACA CAACA  G TAATGG   
 ||| ||| ||      |||||||||||| ||||||||||||||||||||||| |||||  | ||||||    
 ATT AGT CC      GATACAATGCAA TTGCATTGTATGTGTGTGAGTGT GTTGT  C ATTGCC   
A   A   A  TAATGA            C                       C     -- -      CGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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