SE3320165

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7630
  • citrus sinensis
  • SE3320165
  • Mutator
  • M21
  • chr5:30512609-30512767
  • ATATTTTAG
  • GGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATATTTTAG    CCAGC                  CA       T     TT             -CTTGCTAA   AA
         GGGT     TATGTTGCAACAGTGGTA  GTATCAT GTTGC  TCAGCCATTGGAT         TAC  
         ||||     ||||||||||||||||||  ||||||| |||||  |||||||||||||         |||   
         CCCG     ATACAACGTTGTCATCAT  CATGGTG CAACG  GGTCGGTAACCTA         ATG  
GATTTTATA    TTTTA                  AC       T     TT             AATATCAAC   TT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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