SE3320167

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7632
  • citrus sinensis
  • SE3320167
  • Mutator
  • M22
  • chrUn:32805707-32805865
  • GTTAAAGTA
  • GGGTCTAGCTATGGTGCAACTGTGGTACCATACCACAGCTGCACCTAGCCATTGGATTCAGCTATAGTAC

Secondary structure and sequence

TSD    TIR
5'



3' 
GTTAAAGTA    CT             C       C                                   ATA    AT
         GGGT  AGCTATGGTGCAA TGTGGTA CATACCACAGCTGCACCTAGCCATTGGATTCAGCT   GTAC  
         ||||  ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||   ||||   
         CCTA  TTGATACCACGTT ACACCAT GTATGGTGTCGATGTGGATTGGTAATCTAGGTTGA   CGTG  
ATGAAATTG    TT             A       A                                   ---    TG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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