SE3320188

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7653
  • citrus sinensis
  • SE3320188
  • Mutator
  • M47
  • chr7:2730966-2731108
  • AAATAAATA
  • GGGTTTGCCTACCTTACGTTAAATGTAAGGTACAATCCTCTCTCCAGTAGTGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATAAATA   -T    C                                 -TCC   -----       CCCA
         GGG  TTGC TACCTTACGTTAAATGTAAGGTACAATCCTCTC    AGT     AGTGGGT    
         |||  |||| |||||||||||||||||||||||||||||||||    |||     |||||||    A
         CCC  GACG ATGGAATGCAATTTGCATTCCATGTTGGGAGAG    TCA     TTACTCA    
ATAAATAAA   TC    -                                 TGTT   ATTTT       AAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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