SE3320197

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7662
  • citrus sinensis
  • SE3320197
  • Mutator
  • M23
  • chr9:7294058-7294216
  • ATTACTTTG
  • GGGTCCAGCTATGGTGCCACAGTTGTATGGTACCACAGCTGGATCCAACCATTGAATTTAGCTCTGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTACTTTG    CC G                                              A         -    GA
         GGGT  A CTATGGTGCCACAGTTGTATGGTACCACAGCTGGATCCAACCATTG ATTTAGCTC TGGT  
         ||||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||   
         CCTA  T GATACCATGGTGTCAACATACCATGGTGTCGACTTAGGTTGGTAAT TAGATCGGG GTTA  
GTTTCATTA    TT G                                              C         T    AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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