SE3360212

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7677
  • citrus sinensis
  • SE3360212
  • Micron
  • Mim2
  • chr3:2175389-2175594
  • TATATAT
  • TATATATATATATAGTAGTTTTCCAATCAGGGATCCCTGACTTTAATAAAATCAAGGATTAGTTAAAAGATAAAAAAAATTAGATTTTAATACATTAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                                  CC              AT  A             G      A    -           A   --   ATGA
TATATATATATATAGTAGTTTTCCAATCAGGGAT  CTGACTTTAATAAA  CA GGATTAGTTAAAA ATAAAA AAAT TAGATTTTAAT CAT  TAC    
||||||||||||||||||||||||||||||||||  ||||||||||||||  || ||||||||||||| |||||| |||| ||||||||||| |||  |||     
ATATATATATATATCATCAAAAGGTTAGTCCCTA  GACTGAAATTATTT  GT CTTAATCGATTTT TGTTTT TTTG GTCTGAGATTA GTG  ATG    
                                  -A              CC  C             A      A    T           C   AC   AAAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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