SE3320221

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7686
  • citrus sinensis
  • SE3320221
  • Mutator
  • M22
  • chr2:14063264-14063422
  • TAAAAGCTA
  • AGCTAGGGTCCAGCTATGGTGCAACTGTAGTACCATACCAGAGCTACACCCAGTCATTGAATCCAGCTATGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAA    ---     CC                 A        C  G  CTA    C        A      -       AA
    AGCT   AGGGT  AGCTATGGTGCAACTGT GTACCATA CA AG   CACC AGTCATTG ATCCAG CTATGGT  
    ||||   |||||  ||||||||||||||||| |||||||| || ||   |||| |||||||| |||||| |||||||   
    TCGA   TCCCG  TTGATACCACGTTGACA CATGGTAT GT TC   GTGG TCGGTAAC TAGGTC GATATCA  
   A    AAA     TT                 C        A  G  AAC    T        C      A       AC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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