SE3320233

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7698
  • citrus sinensis
  • SE3320233
  • Mutator
  • M5
  • chr4:11144311-11144469
  • TATATATAT
  • ATATATATGGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T            -AAAC                    C                CAA           - -------    AA
 ATATATATGGGG     CTGTGGTGCAACTGTGGTAC GTGCCACAGTTGCATC   CCGTTGGATGC C       AGTG  
 ||||||||||||     |||||||||||||||||||| ||||||||||||||||   ||||||||||| |       ||||  C
 TATATATATCCT     GATGCCACGTTGACACCATG CACGGTGTCAACGTAG   GGCAACCTACG G       TCAC  
             AGTCT                    A                ATC           T AACCTAA    CC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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