SE3320234

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7699
  • citrus sinensis
  • SE3320234
  • Mutator
  • M5
  • chr5:19300415-19300573
  • ATATATATA
  • ATATATATAGGATCAGGCTACAGTGCAACTGTGGTACCGTGCCACAGTTGCATCCAACCGTTGGATGCACTTGGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
         A  ATC     -ACA              C                   A           ACT      GG
 ATATATAT GG   AGGCT    GTGCAACTGTGGTA CGTGCCACAGTTGCATCCA CCGTTGGATGC   TGGATT  
 |||||||| ||   |||||    |||||||||||||| ||||||||||||||||||| |||||||||||   ||||||  T
 TATATATA CC   TTTGG    CACGTTGACACCAT GCACGGTGTCAACGTAGGT GGCAACCTACG   ACCTGA  
A        C  --C     ACGC              A                   C           ATC      GG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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