SE3320247

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7712
  • citrus sinensis
  • SE3320247
  • Mutator
  • M2
  • chrUn:69263010-69263229
  • TTACTAAAT
  • GAGTAATGATACAGCCACAAACTCTTGTACAAACTTATTTTGTACAAACTGACGTGGCAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTACTAAAT                                                    C       TAATTC           GA      AAA   ATAAAAATAA
         GAGTAATGATACAGCCACAAACTCTTGTACAAACTTATTTTGTACAAACTGA GTGGCAT      ATTGGTTGAAT  AAATAT   TTA          
         |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      |||||||||||  ||||||   |||          A
         CTCATTACTATGTCGGTGTTTGAGAACATGTTTGAATAAAACATGTTTGACT CACCGTA      TAACCAACTTA  TTTATA   AAT          
TAAATCATT                                                    A       CTATTT           -A      GTG   CGGGTGTACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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