SE3350250

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7715
  • citrus sinensis
  • SE3350250
  • PIF/harbinger
  • To1
  • chr5:1401472-1401607
  • TTA
  • AGAGTCGTTTGGGGCAGCTGCGCTGCCACCGCGCAGCTGCTTCCCAGGCCAATTCTAGGGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAC   G C                                        G       C       AT
    AGA T GTTTGGGGCAGCTGCGCTGCCACCGCGCAGCTGCTTCCCA GCCAATT TAGGGGA  
    ||| | |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||   
    TCT G CAAACCCCGTCGACGCGACGGTGGCGCGTCGATGAGGGGT CGGTTAA ATCCCTT  
ACAT   G A                                        A       A       TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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