SE3360254

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7719
  • citrus sinensis
  • SE3360254
  • Micron
  • Mim2
  • chr6:19670484-19670704
  • ATATATA
  • ATATATATATGAGTAGTTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                      C   G  ACAGCAGTTCAATCAGGGATCCCTGATTTTAATAAAGTCAGAGATTAGCTAAAAGACAAAATAAACACATACTCTAATGCAT
 ATATATATATGAGTAGTTTTT AAC GT                                                                                  
 ||||||||||||||||||||| ||| ||                                                                                   
 TATATATATACTCATCAAAAG TTA GT                                                                                  
A                     A   -  CCCTAGAGATTGAAATTATTTCAGTACCTAATCGATTTTCTATTTTTTCAAATCTAAAATGATGTGATGTACTATTTTATGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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