SE3320275

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7740
  • citrus sinensis
  • SE3320275
  • Mutator
  • M23
  • chr7:2555982-2556140
  • TAAATAACT
  • GGGCAAAACTATGGTACCACAGTTGTATGATACCACAACTGGATCCAACCATTGGAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAATAACT   CAA  C      A             A       A         AC        CTAACCTA     ATCA
         GGG   AA TATGGT CCACAGTTGTATG TACCACA CTGGATCCA  CATTGGAT        CAGTT    
         |||   || |||||| ||||||||||||| ||||||| |||||||||  ||||||||        |||||     
         CCC   TT ATACCA GGTGTCAACATAC ATGGTGT GACCTAGGT  GTAATCTA        GTCAA    
TCAATAAAT   AGG  A      C             C       C         CA        -------A     AACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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