SE3320282

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7747
  • citrus sinensis
  • SE3320282
  • Mutator
  • M21
  • chr7:10718109-10718267
  • CTGTTTGAT
  • GGGCAAAACTATGTTGTAATAGTAGTACGGTACCACTATTGTAATCAGCCATTAGATTTATAATTGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTGTTTGAT   CAA                 A             A    AA         A     -  AAT    TA
         GGG   AACTATGTTGTAATAGT GTACGGTACCACT TTGT  TCAGCCATT GATTT AT   TGTA  
         |||   ||||||||||||||||| ||||||||||||| ||||  ||||||||| ||||| ||   ||||   
         CCC   TTGATACAACGTTATCA CATGCCATGGTGG AACG  AGTCGGTAA TTAGA TG   ACAT  
TAGTTTGTC   AGG                 C             C    AA         C     A  ATT    TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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