SE3320289

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7754
  • citrus sinensis
  • SE3320289
  • Mutator
  • M11
  • chr9:1472010-1472149
  • TTTCGGAAT
  • TTTCGGAATGGCCACTGCTATGTTACGTTGAGTGTAACATACACACACTCACAGCAACAGTAAAATG

Secondary structure and sequence

TSD    TIR
5'



3' 
         T  C    G                                              AAT ATG
 TTTCGGAA GG CACT CTATGTTACGTTGAGTGTAACATACACACACTCACAGCAACAGTAA   G   
 |||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||   |    
 AAGGCTTT CC GTGG GATACAATGCAACTCACATTGTATGTGTGTGAGTGTCGTTGTCATT   C   
T        C  A    -                                              GTT AGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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