SE3320294

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7759
  • citrus sinensis
  • SE3320294
  • Mutator
  • M13
  • chr4:8799344-8799484
  • TAACTAGAA
  • CTAGAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAA    -A   ATCCCT                  C      A                        ACC
   CTAG  AGG      CTAAGTTACATGCATGTA CTTACA CCCTCTCACATGAATAGTGAGTGG   
   ||||  |||      |||||||||||||||||| |||||| ||||||||||||||||||||||||   C
   GATC  TCC      GATTCAATGTATGTATAT GAATGT GGGAGAGTGTACTTATCACTTACT   
 AA    AA   GATTAC                  A      G                        ACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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