SE3320295

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7760
  • citrus sinensis
  • SE3320295
  • Mutator
  • M37
  • chr4:3678467-3678608
  • TAATGATAA
  • ATGATAAGGCTTTTGCTACCTTACATGCACGTAAGGTACAACCTCTCACAAGGCTGGTGGGTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
TA  G  A   CTT          A                 -A              ----G        AA
  AT AT AGG   TTGCTACCTT CATGCACGTAAGGTACA  CCTCTCACAAGGCT     GTGGGTCT  
  || || |||   |||||||||| |||||||||||||||||  ||||||||||||||     ||||||||  G
  TA TA TCC   GACGATGGAA GTACGTGCATTCCATGT  GGAGAGTGTTTTGA     CACCCAGG  
AA  G  A   CTC          C                 CA              ATCTA        GT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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