SE3320299

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7764
  • citrus sinensis
  • SE3320299
  • Mutator
  • M9
  • chr1:4531004-4531149
  • CTTTTTCAA
  • AAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTTTTC    -CAAA G                        C                        T   TGG
       AAGG     T CTATGTTACAATTAATGTAACATA ACACTCAACAACAACCACACAAAT GTG   
       ||||     | |||||||||||||||||||||||| |||||||||||||||||||||||| |||    
       TTCC     G GATACAATGTTAATTACATTGTAT TGTGAGTTGTTGTTGGTGTGTTTA TAC   
 AACTTT    CCTCG G                        T                        T   CCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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