SE3320306

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7771
  • citrus sinensis
  • SE3320306
  • Mutator
  • M55
  • chr9:6194075-6194211
  • CAATTATTA
  • TGGTGCTACGTTACGTTAAGCGTAACATACACCACACACAATAATAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
CAATTATTAGAC   -----     C       TAA       A  -CA         A       AATAGATCT
            TGG     TGCTA GTTACGT   GCGTAAC TA   CCACACACA TAATAAT         
            |||     ||||| |||||||   ||||||| ||   ||||||||| |||||||         C
            ACC     ACGAT CAATGCA   CGCATTG AT   GGTGTGTGT GTTATTA         
     ATTATTA   CTAGG     A       ---       C  ATA         A       AAAATACTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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