SE3320322

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7787
  • citrus sinensis
  • SE3320322
  • Mutator
  • M5
  • chrUn:29736752-29736910
  • TATTTATTA
  • TAGGATCAGGCTACGGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGCCGTTGGATGCAGTTGGATT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTAT    ATC  G  AC                                               -   T     AG
       TAGG   AG CT  GGTGCAACTGTGGCACCGTGCCACAGTTGCATCTAGCCGTTGGATGC AGT GGATT  
       ||||   || ||  ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  T
       ATCC   TT GA  CCACGTTGACACCGTGGCACGGTGTCAACGTAGATCGGCAACCTACG TCA CCTGG  
ATTATTT    CCT  G  AT                                               G   -     GA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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