SE3320330

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_7795
  • citrus sinensis
  • SE3320330
  • Mutator
  • M5
  • chr5:28737081-28737239
  • ACTTTTGCA
  • TGCAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
ACTTT    -----   TCTT   AC                                              CATTTA     TTG
     TGCA     GGG    GCT  GGTGCAACTGTGGTACTGTGCTACAGTTGCATTCAGCCGTTGGATC      GATGG   
     ||||     |||    |||  ||||||||||||||||||||||||||||||||||||||||||||||      |||||   G
     ACGT     CCC    TGA  CCACGTTGACACCATGGCACGGTGTCAACGTGAGTTGGCAACCTAG      TTACC   
         TTTCA   TTTT   CA                                              ----AG     TGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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